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    CASKIN2 CASK interacting protein 2 [ Pseudonaja textilis ]

    Gene ID: 113437140, updated on 15-Mar-2024

    Summary

    Gene symbol
    CASKIN2
    Gene description
    CASK interacting protein 2
    See related
    Ensembl:ENSPTXG00000002272
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pseudonaja textilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
    Orthologs
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    Genomic context

    See CASKIN2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769325.1 (11102393..11200540, complement)

    NW_020769325.1Genomic Context describing neighboring genes Neighboring gene growth factor receptor bound protein 2 Neighboring gene transmembrane protein 94 Neighboring gene tRNA splicing endonuclease subunit 54 Neighboring gene LLGL scribble cell polarity complex component 2

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_020769325 Unplaced Scaffold Reference EBS10Xv2-PRI

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EBS10Xv2-PRI

    Genomic

    1. NW_020769325.1 Reference EBS10Xv2-PRI

      Range
      11102393..11200540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026701982.1XP_026557767.1  caskin-2 isoform X4

      Conserved Domains (8) summary
      cd09497
      Location:442507
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:508578
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12063
      Location:284345
      SH3_Caskin2; Src Homology 3 domain of CASK interacting protein 2
      cd00204
      Location:109241
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:114145
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:223261
      Ank_4; Ankyrin repeats (many copies)
      pfam16632
      Location:13581417
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:864945
      Caskin-Pro-rich; Proline rich region of Caskin proteins
    2. XM_026701981.1XP_026557766.1  caskin-2 isoform X3

      UniProtKB/TrEMBL
      A0A670Y0Z5
      Related
      ENSPTXP00000002967.1, ENSPTXT00000003051.1
      Conserved Domains (8) summary
      cd09497
      Location:443508
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:509579
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12063
      Location:284345
      SH3_Caskin2; Src Homology 3 domain of CASK interacting protein 2
      cd00204
      Location:109241
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:114145
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:223261
      Ank_4; Ankyrin repeats (many copies)
      pfam16632
      Location:13591418
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:865946
      Caskin-Pro-rich; Proline rich region of Caskin proteins
    3. XM_026701980.1XP_026557765.1  caskin-2 isoform X2

      Conserved Domains (8) summary
      cd09497
      Location:470535
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:536606
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12063
      Location:284345
      SH3_Caskin2; Src Homology 3 domain of CASK interacting protein 2
      cd00204
      Location:109241
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:114145
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:223261
      Ank_4; Ankyrin repeats (many copies)
      pfam16632
      Location:13861445
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:892973
      Caskin-Pro-rich; Proline rich region of Caskin proteins
    4. XM_026701979.1XP_026557764.1  caskin-2 isoform X1

      Conserved Domains (8) summary
      cd09497
      Location:508573
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:574644
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12063
      Location:284345
      SH3_Caskin2; Src Homology 3 domain of CASK interacting protein 2
      cd00204
      Location:109241
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:114145
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:223261
      Ank_4; Ankyrin repeats (many copies)
      pfam16632
      Location:14241483
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:9301011
      Caskin-Pro-rich; Proline rich region of Caskin proteins