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    LOC113406541 5'-AMP-activated protein kinase catalytic subunit alpha-2 [ Terrapene triunguis (Three-toed box turtle) ]

    Gene ID: 113406541, updated on 28-Nov-2024

    Summary

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    Gene symbol
    LOC113406541
    Gene description
    5'-AMP-activated protein kinase catalytic subunit alpha-2
    See related
    Ensembl:ENSTMTG00000015918
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Terrapene triunguis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
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    Genomic context

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    See LOC113406541 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664454.1 (1341155..1372001, complement)

    NW_020664454.1Genomic Context describing neighboring genes Neighboring gene complement component C8 alpha chain Neighboring gene FYN-binding protein 2 Neighboring gene phospholipid phosphatase 3 Neighboring gene small nucleolar RNA Z39

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020664454 Unplaced Scaffold Reference T_m_triunguis-2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables AMP-activated protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-AMP-activated protein kinase catalytic subunit alpha-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T_m_triunguis-2.0

    Genomic

    1. NW_020664454.1 Reference T_m_triunguis-2.0

      Range
      1341155..1372001 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026651817.2 → XP_026507602.1  5'-AMP-activated protein kinase catalytic subunit alpha-2

      UniProtKB/TrEMBL
      A0A674JRJ2
      Related
      ENSTMTP00000021814.1, ENSTMTT00000022588.1
      Conserved Domains (3) summary
      cd12200
      Location:395 → 549
      AMPKA2_C; C-terminal regulatory domain of 5'-AMP-activated serine/threonine kinase, subunit alpha
      cd14404
      Location:285 → 349
      UBA_AID_AAPK2; UBA-like autoinhibitory domain (AID) found in vertebrate 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPKalpha-2)
      cd14079
      Location:13 → 268
      STKc_AMPK_alpha; Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase
    Nucleotide Protein
    Heading Accession and Version

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