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    GSPATT00016894001 uncharacterized protein [ Paramecium tetraurelia ]

    Gene ID: 5035689, updated on 23-Nov-2023

    Summary

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    Gene symbol
    GSPATT00016894001
    Gene description
    uncharacterized protein
    Locus tag
    GSPATT00016894001
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Paramecium tetraurelia (strain: Stock d4-2)
    Lineage
    Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium
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    Genomic context

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    See GSPATT00016894001 in Genome Data Viewer
    Location:
    chromosome: undetermined
    Exon count:
    2

    NW_001799400.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001799400.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Aury JM, et al. Nature, 2006 Nov 9. PMID 17086204
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycogen phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycogen catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001799400.1 Reference assembly

      Range
      280260..282854 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001449867.2 → XP_001449904.1  uncharacterized protein GSPATT00016894001 [Paramecium tetraurelia]

      See identical proteins and their annotated locations for XP_001449904.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0DHJ0
      Conserved Domains (2) summary
      cd04300
      Location:13 → 812
      GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
      TIGR02093
      Location:16 → 812
      P_ylase; glycogen/starch/alpha-glucan phosphorylases
    Nucleotide Protein
    Heading Accession and Version

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