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    LPP3 lipid phosphate phosphatase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821299, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LPP3
    Official Full Name
    lipid phosphate phosphatase 3
    Primary source
    TAIR:AT3G02600
    Locus tag
    AT3G02600
    See related
    Araport:AT3G02600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATLPP3; F16B3.23; F16B3_23; lipid phosphate phosphatase 3; LIPID PHOSPHATE PHOSPHATASE 3
    Summary
    Encodes phosphatidic acid phosphatase. Expressed during germination.
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    Genomic context

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    See LPP3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (550975..554697)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene sterol 1 Neighboring gene Fatty acid hydroxylase superfamily protein Neighboring gene plant stearoyl-acyl-carrier desaturase family protein Neighboring gene Plant stearoyl-acyl-carrier-protein desaturase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Lipid phosphate phosphatases in Arabidopsis. Regulation of the AtLPP1 gene in response to stress. Pierrugues O, et al. J Biol Chem, 2001 Jun 8. PMID 11278556
    2. Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2004 Jul. PMID 15060130
    3. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001084626.2
    NM_001084627.1
    NM_001084628.2
    NM_001084629.2
    NM_001337419.1
    NM_001337420.1
    NM_001337421.1
    NM_001337422.1
    NM_001337423.1
    NM_001337424.1
    NM_001337425.1
    NM_111128.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidate phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phospholipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phospholipid metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    lipid phosphate phosphatase 3
    NP_001078095.1
    • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2093 Blast hits to 2088 proteins in 398 species: Archae - 13; Bacteria - 367; Metazoa - 924; Fungi - 390; Plants - 200; Viruses - 7; Other Eukaryotes - 192 (source: NCBI BLink).
    NP_001078096.1
    • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink).
    NP_001078098.1
    • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink).
    NP_001319453.1
    • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink).
    NP_566177.1
    • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2088 Blast hits to 2083 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 922; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      550975..554697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084629.2 → NP_001078098.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078098.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    2. NM_001337421.1 → NP_001319453.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    3. NM_001337422.1 → NP_001327800.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    4. NM_001337423.1 → NP_001327797.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    5. NM_111128.2 → NP_566177.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566177.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MR10, Q8LFD1, Q9M882
      UniProtKB/TrEMBL
      A0A5S9X8H7, A0A654F3H4
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 364
      PLN02731; Putative lipid phosphate phosphatase

    6. NM_001084626.2 → NP_001078095.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078095.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VF41
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 333
      PLN02731; Putative lipid phosphate phosphatase

    7. NM_001337425.1 → NP_001327799.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    8. NM_001337424.1 → NP_001327798.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    9. NM_001337419.1 → NP_001327801.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    10. NM_001337420.1 → NP_001327802.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    11. NM_001084628.2 → NP_001078097.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078097.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase

    12. NM_001084627.1 → NP_001078096.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078096.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
      Conserved Domains (1) summary
      PLN02731
      Location:1 → 314
      PLN02731; Putative lipid phosphate phosphatase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LFD1.1

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