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    DYAD protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832427, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DYAD protein
    Primary source
    TAIR:AT5G23610
    Locus tag
    AT5G23610
    See related
    Araport:AT5G23610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQM1.12; MQM1_12
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (7957249..7960446, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Transmembrane CLPTM1 family protein Neighboring gene calmodulin-like domain protein kinase 9 Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene RNA 2'-phosphotransferase, Tpt1 / KptA family Neighboring gene phosphate deficiency response 2 Neighboring gene Homeodomain-like transcriptional regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001036854.3
    NM_122267.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in meiotic sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in reciprocal meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DYAD protein
    NP_001031931.2
    • INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: SWITCH1 (TAIR:AT5G51330.1); Has 173 Blast hits to 168 proteins in 34 species: Archae - 3; Bacteria - 10; Metazoa - 6; Fungi - 2; Plants - 115; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
    NP_197751.3
    • BEST Arabidopsis thaliana protein match is: SWITCH1 (TAIR:AT5G51330.1); Has 170 Blast hits to 162 proteins in 36 species: Archae - 3; Bacteria - 6; Metazoa - 6; Fungi - 4; Plants - 117; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7957249..7960446 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122267.5 → NP_197751.3  DYAD protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197751.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBZ2, A0A7G2FCJ9, F4KE83

    2. NM_001036854.3 → NP_001031931.2  DYAD protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031931.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAF1, A0A7G2FCJ9, F4KE84
    Nucleotide Protein
    Heading Accession and Version

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