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    C3AR1 complement C3a receptor 1 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

    Gene ID: 112391946, updated on 15-Mar-2024

    Summary

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    Gene symbol
    C3AR1
    Gene description
    complement C3a receptor 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
    Orthologs
    human mouse all
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    Genomic context

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    See C3AR1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020176571.1 (6611181..6623715)

    NW_020176571.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 4 member D-like Neighboring gene NECAP endocytosis associated 1 Neighboring gene forkhead box J2 Neighboring gene translation initiation factor IF-2-like Neighboring gene acylphosphatase-1 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020176571 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables complement component C3a receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables complement component C5a receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in complement receptor mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C3a anaphylatoxin chemotactic receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Genomic

    1. NW_020176571.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

      Range
      6611181..6623715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024733528.1 → XP_024589296.1  C3a anaphylatoxin chemotactic receptor

      UniProtKB/TrEMBL
      A0A341AFA2
      Conserved Domains (2) summary
      cd15115
      Location:26 → 50
      7tmA_C3aR; TM helix 1 [structural motif]
      cl28897
      Location:24 → 446
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    2. XM_024733529.1 → XP_024589297.1  C3a anaphylatoxin chemotactic receptor

      UniProtKB/TrEMBL
      A0A341AFA2
      Conserved Domains (2) summary
      cd15115
      Location:26 → 50
      7tmA_C3aR; TM helix 1 [structural motif]
      cl28897
      Location:24 → 446
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    3. XM_024733527.1 → XP_024589295.1  C3a anaphylatoxin chemotactic receptor

      UniProtKB/TrEMBL
      A0A341AFA2
      Conserved Domains (2) summary
      cd15115
      Location:26 → 50
      7tmA_C3aR; TM helix 1 [structural motif]
      cl28897
      Location:24 → 446
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

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