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    BCIN_11g06050 hypothetical protein [ Botrytis cinerea B05.10 ]

    Gene ID: 5427082, updated on 21-Dec-2023

    Summary

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    Gene symbol
    BCIN_11g06050
    Gene description
    hypothetical protein
    Locus tag
    BCIN_11g06050
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Botrytis cinerea B05.10 (strain: B05.10)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
    Old locus tag
    BC1G_14865
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    Genomic context

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    See BCIN_11g06050 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Sequence:
    Chromosome: 11; NC_037320.1 (2140746..2145244)

    Chromosome 11 - NC_037320.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037320.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A gapless genome sequence of the fungus Botrytis cinerea. Van Kan JA, et al. Mol Plant Pathol, 2017 Jan. PMID 26913498, Free PMC Article
    2. Genome update of Botrytis cinerea strains B05.10 and T4. Staats M, et al. Eukaryot Cell, 2012 Nov. PMID 23104368, Free PMC Article
    3. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in early endosome to late endosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in tubular endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037320.1 Reference assembly

      Range
      2140746..2145244
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024696109.1 → XP_024551913.1  hypothetical protein BCIN_11g06050 [Botrytis cinerea B05.10]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A384JXU6, G2YEW1
      Conserved Domains (4) summary
      cd06093
      Location:939 → 1021
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
      cd00204
      Location:764 → 888
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:768 → 813
      ANK; ANK repeat [structural motif]
      cl19569
      Location:386 → 501
      VPS9; Vacuolar sorting protein 9 (VPS9) domain
    Nucleotide Protein
    Heading Accession and Version

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