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    LOC112295592 N-carbamoylputrescine amidase-like [ Physcomitrium patens ]

    Gene ID: 112295592, updated on 20-Sep-2024

    Summary

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    Gene symbol
    LOC112295592
    Gene description
    N-carbamoylputrescine amidase-like
    Locus tag
    PHYPA_022874
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Physcomitrium patens
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
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    Genomic context

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    See LOC112295592 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current Phypa V3 (GCF_000002425.4) 18 NC_037270.1 (5758155..5759830)

    Chromosome 18 - NC_037270.1Genomic Context describing neighboring genes Neighboring gene putative E3 ubiquitin-protein ligase UBR7 Neighboring gene serine--glyoxylate aminotransferase-like Neighboring gene protein RFT1 homolog Neighboring gene brefeldin A-inhibited guanine nucleotide-exchange protein 5-like Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037270.1 Chromosome 18 Reference Phypa V3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N-carbamoylputrescine amidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in putrescine biosynthetic process from arginine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    N-carbamoylputrescine amidase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Phypa V3 Primary Assembly

    Genomic

    1. NC_037270.1 Reference Phypa V3 Primary Assembly

      Range
      5758155..5759830
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024547378.1 → XP_024403146.1  N-carbamoylputrescine amidase-like

      UniProtKB/TrEMBL
      A9RNQ5
      Conserved Domains (1) summary
      PLN02747
      Location:1 → 296
      PLN02747; N-carbamolyputrescine amidase
    Nucleotide Protein
    Heading Accession and Version

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