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    EIF2 GAMMA eukaryotic translation initiation factor 2 gamma subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839238, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EIF2 GAMMA
    Official Full Name
    eukaryotic translation initiation factor 2 gamma subunit
    Primary source
    TAIR:AT1G04170
    Locus tag
    AT1G04170
    See related
    Araport:AT1G04170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    eukaryotic translation initiation factor 2 gamma subunit; F20D22.6; F20D22_6
    Summary
    protein synthesis initiation factor eIF2 gamma
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    Genomic context

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    See EIF2 GAMMA in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (1096882..1099901)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene myosin XI B Neighboring gene YUCCA 9 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    2. Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. Van Leene J, et al. Nat Plants, 2019 Mar. PMID 30833711
    3. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
    4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_100298.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables translation initiation factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular region HDA PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 2 gamma subunit
    NP_171913.1
    • eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1096882..1099901
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331466.1 → NP_001320247.1  eukaryotic translation initiation factor 2 gamma subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKN5, A0A384KBB6, O64490, Q8LAP5
      Conserved Domains (1) summary
      PTZ00327
      Location:3 → 463
      PTZ00327; eukaryotic translation initiation factor 2 gamma subunit; Provisional

    2. NM_100298.3 → NP_171913.1  eukaryotic translation initiation factor 2 gamma subunit [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171913.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKN5, A0A384KBB6, O64490, Q8LAP5
      Conserved Domains (1) summary
      PTZ00327
      Location:3 → 463
      PTZ00327; eukaryotic translation initiation factor 2 gamma subunit; Provisional
    Nucleotide Protein
    Heading Accession and Version

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