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    LOC111891104 respiratory burst oxidase homolog protein C [ Lactuca sativa (garden lettuce) ]

    Gene ID: 111891104, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC111891104
    Gene description
    respiratory burst oxidase homolog protein C
    Locus tag
    LSAT_V11C500232690
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lactuca sativa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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    Genomic context

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    See LOC111891104 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 5 NC_056627.2 (21294918..21299555)
    101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 5 NC_056627.1 (18671214..18675844)

    Chromosome 5 - NC_056627.2Genomic Context describing neighboring genes Neighboring gene U2 small nuclear ribonucleoprotein A' Neighboring gene uncharacterized LOC111914840 Neighboring gene uncharacterized LOC111891102 Neighboring gene uncharacterized LOC111891101

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD(P)H oxidase H2O2-forming activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    respiratory burst oxidase homolog protein C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Lsat_Salinas_v11 Primary Assembly

    Genomic

    1. NC_056627.2 Reference Lsat_Salinas_v11 Primary Assembly

      Range
      21294918..21299555
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023887189.3 → XP_023742957.1  respiratory burst oxidase homolog protein C

      UniProtKB/TrEMBL
      A0A9R1VKW2
    Nucleotide Protein
    Heading Accession and Version

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