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    SPATA6L spermatogenesis associated 6 like [ Pan troglodytes (chimpanzee) ]

    Gene ID: 737893, updated on 3-Dec-2024

    Summary

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    Official Symbol
    SPATA6Lprovided by VGNC
    Official Full Name
    spermatogenesis associated 6 likeprovided by VGNC
    Primary source
    VGNC:VGNC:8937
    Locus tag
    CK820_G0023705
    See related
    Ensembl:ENSPTRG00000020740
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See SPATA6L in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (111240579..111404551)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (7457093..7622303, complement)

    Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein uS7-like Neighboring gene small ribosomal subunit protein eS6-like Neighboring gene cell division cycle 37 like 1, HSP90 cochaperone Neighboring gene adenylate kinase 3 Neighboring gene phospholipid phosphatase 6 Neighboring gene solute carrier family 1 member 1 Neighboring gene GLIS family zinc finger 3 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC134807755

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables myosin light chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spermatogenesis associated 6-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      111240579..111404551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063788754.1 → XP_063644824.1  spermatogenesis associated 6-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2I3RQ05, A0A2J8M511, A0A2J8M512, A0A6D2XM98, A0A6D2XZN4, H2R1C6

    2. XM_063788755.1 → XP_063644825.1  spermatogenesis associated 6-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2I3RQ05, A0A2J8M511, A0A2J8M512, A0A6D2XM98, A0A6D2XZN4, H2R1C6

    3. XM_054658650.2 → XP_054514625.1  spermatogenesis associated 6-like protein isoform X4

    4. XM_063788766.1 → XP_063644836.1  spermatogenesis associated 6-like protein isoform X6

    5. XM_054658645.2 → XP_054514620.1  spermatogenesis associated 6-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2I3RQ05, A0A2J8M511, A0A2J8M512, A0A6D2XM98, A0A6D2XZN4, H2R1C6

    6. XM_054658647.2 → XP_054514622.1  spermatogenesis associated 6-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2I3RQ05, A0A2J8M511, A0A2J8M512, A0A6D2XM98, A0A6D2XZN4, H2R1C6

    7. XM_054658648.2 → XP_054514623.1  spermatogenesis associated 6-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    8. XM_054658649.2 → XP_054514624.1  spermatogenesis associated 6-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    9. XM_016960547.4 → XP_016816036.1  spermatogenesis associated 6-like protein isoform X4

    10. XM_063788762.1 → XP_063644832.1  spermatogenesis associated 6-like protein isoform X5

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    11. XM_063788765.1 → XP_063644835.1  spermatogenesis associated 6-like protein isoform X6

    12. XM_063788767.1 → XP_063644837.1  spermatogenesis associated 6-like protein isoform X6

    13. XM_063788752.1 → XP_063644822.1  spermatogenesis associated 6-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2I3RQ05, A0A2J8M511, A0A2J8M512, A0A6D2XM98, A0A6D2XZN4, H2R1C6

    14. XM_063788756.1 → XP_063644826.1  spermatogenesis associated 6-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    15. XM_063788757.1 → XP_063644827.1  spermatogenesis associated 6-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    16. XM_063788753.1 → XP_063644823.1  spermatogenesis associated 6-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2I3RQ05, A0A2J8M511, A0A2J8M512, A0A6D2XM98, A0A6D2XZN4, H2R1C6

    17. XM_063788761.1 → XP_063644831.1  spermatogenesis associated 6-like protein isoform X5

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    18. XM_063788764.1 → XP_063644834.1  spermatogenesis associated 6-like protein isoform X5

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    19. XM_063788763.1 → XP_063644833.1  spermatogenesis associated 6-like protein isoform X5

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    20. XM_063788759.1 → XP_063644829.1  spermatogenesis associated 6-like protein isoform X3

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    21. XM_063788760.1 → XP_063644830.1  spermatogenesis associated 6-like protein isoform X3

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    22. XM_016960545.2 → XP_016816034.1  spermatogenesis associated 6-like protein isoform X3

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    23. XM_063788758.1 → XP_063644828.1  spermatogenesis associated 6-like protein isoform X3

      UniProtKB/TrEMBL
      A0A2J8M511, A0A6D2XM98, H2R1C6

    RNA

    1. XR_001720650.3 RNA Sequence

    2. XR_008537225.2 RNA Sequence

    3. XR_008537221.2 RNA Sequence

    4. XR_001720651.3 RNA Sequence

    5. XR_008537228.2 RNA Sequence

    6. XR_008537234.2 RNA Sequence

    7. XR_008537227.2 RNA Sequence

    8. XR_008537231.2 RNA Sequence

    9. XR_008537220.2 RNA Sequence

    10. XR_008537219.2 RNA Sequence

    11. XR_010148986.1 RNA Sequence

    12. XR_010148984.1 RNA Sequence

    13. XR_010148985.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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