U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Pask PAS domain containing serine/threonine kinase [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100731396, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Pask
    Gene description
    PAS domain containing serine/threonine kinase
    See related
    Ensembl:ENSCPOG00000006277
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Pask in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947509.1 (27669991..27692813)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176406.1 (23152140..23174034)

    NW_026947509.1Genomic Context describing neighboring genes Neighboring gene high density lipoprotein binding protein Neighboring gene uncharacterized LOC134473255 Neighboring gene protein phosphatase 1 regulatory subunit 7 Neighboring gene uncharacterized LOC134473257 Neighboring gene mitochondrial transcription termination factor 4 Neighboring gene sushi, nidogen and EGF like domains 1 Neighboring gene ciliary rootlet coiled-coil, rootletin family member 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of glycogen biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    PAS domain-containing serine/threonine-protein kinase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947509.1 Reference mCavPor4.1

      Range
      27669991..27692813
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023566990.2 → XP_023422758.1  PAS domain-containing serine/threonine-protein kinase isoform X1

      UniProtKB/TrEMBL
      H0V7F2
      Conserved Domains (2) summary
      cd00130
      Location:132 → 231
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      cd14004
      Location:1017 → 1270
      STKc_PASK; Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase

    2. XM_023566992.2 → XP_023422760.1  PAS domain-containing serine/threonine-protein kinase isoform X2

      Conserved Domains (2) summary
      cd00130
      Location:132 → 231
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      cd14004
      Location:1001 → 1254
      STKc_PASK; Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase

    3. XM_023566991.2 → XP_023422759.1  PAS domain-containing serine/threonine-protein kinase isoform X1

      UniProtKB/TrEMBL
      H0V7F2
      Related
      ENSCPOP00000005659.3
      Conserved Domains (2) summary
      cd00130
      Location:132 → 231
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      cd14004
      Location:1017 → 1270
      STKc_PASK; Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase

    4. XM_063236967.1 → XP_063093037.1  PAS domain-containing serine/threonine-protein kinase isoform X1

      UniProtKB/TrEMBL
      H0V7F2

    5. XM_063236969.1 → XP_063093039.1  PAS domain-containing serine/threonine-protein kinase isoform X4

    6. XM_063236968.1 → XP_063093038.1  PAS domain-containing serine/threonine-protein kinase isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.