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    psmb7 proteasome 20S subunit beta 7 [ Amphiprion ocellaris (clown anemonefish) ]

    Gene ID: 111579146, updated on 3-Dec-2024

    Summary

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    Gene symbol
    psmb7
    Gene description
    proteasome 20S subunit beta 7
    See related
    Ensembl:ENSAOCG00000022660
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amphiprion ocellaris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
    Orthologs
    zebrafish all
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    Genomic context

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    See psmb7 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 17 NC_072782.1 (24572265..24578996)
    101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019373247.1 (388706..395439)

    Chromosome 17 - NC_072782.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111579161 Neighboring gene nuclear receptor subfamily 5 group A member 2-like Neighboring gene DENN/MADD domain containing 1A Neighboring gene uncharacterized LOC129350914

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables threonine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome subunit beta type-7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2253959v1 Primary Assembly

    Genomic

    1. NC_072782.1 Reference ASM2253959v1 Primary Assembly

      Range
      24572265..24578996
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023286298.3 → XP_023142066.1  proteasome subunit beta type-7 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1CZS4, A0AAQ5Z8W2
      Related
      ENSAOCP00000031189.1, ENSAOCT00000026937.2
      Conserved Domains (2) summary
      cd03763
      Location:44 → 232
      proteasome_beta_type_7; proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
      pfam12465
      Location:237 → 280
      Pr_beta_C; Proteasome beta subunits C terminal

    2. XM_023286299.3 → XP_023142067.1  proteasome subunit beta type-7 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1BXB2, A0AAQ5Z8W2
      Related
      ENSAOCP00000017569.1, ENSAOCT00000026921.2
      Conserved Domains (2) summary
      cd03763
      Location:44 → 232
      proteasome_beta_type_7; proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
      pfam12465
      Location:237 → 271
      Pr_beta_C; Proteasome beta subunits C terminal
    Nucleotide Protein
    Heading Accession and Version

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