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    LOC110885536 serine/threonine-protein kinase STY46 [ Helianthus annuus (common sunflower) ]

    Gene ID: 110885536, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC110885536
    Gene description
    serine/threonine-protein kinase STY46
    Locus tag
    HanXRQr2_Chr10g0438261
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Helianthus annuus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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    Genomic context

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    See LOC110885536 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 10 NC_035442.2 (92437091..92445709, complement)
    100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 10 NC_035442.1 (153106217..153114657)

    Chromosome 10 - NC_035442.2Genomic Context describing neighboring genes Neighboring gene arginine/serine-rich protein PNISR-like Neighboring gene uncharacterized LOC110882311 Neighboring gene uncharacterized LOC118482899 Neighboring gene small nucleolar RNA R71

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase STY46
    Names
    putative ACT-like protein tyrosine kinase family protein
    putative dual-specificity kinase TKL-Pl-4 family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HanXRQr2.0-SUNRISE Primary Assembly

    Genomic

    1. NC_035442.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

      Range
      92437091..92445709 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022133236.2 → XP_021988928.1  serine/threonine-protein kinase STY46 isoform X2

      UniProtKB/TrEMBL
      A0A251TLF6
      Conserved Domains (2) summary
      cd04928
      Location:181 → 247
      ACT_TyrKc; Uncharacterized, N-terminal ACT domain of an Arabidopsis/Oryza predicted tyrosine kinase and other related ACT domains
      cd13999
      Location:301 → 544
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases

    2. XM_022133235.2 → XP_021988927.1  serine/threonine-protein kinase STY46 isoform X1

      Conserved Domains (2) summary
      cd04928
      Location:181 → 247
      ACT_TyrKc; Uncharacterized, N-terminal ACT domain of an Arabidopsis/Oryza predicted tyrosine kinase and other related ACT domains
      cd13999
      Location:310 → 553
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases
    Nucleotide Protein
    Heading Accession and Version

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