U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    ClpP Caseinolytic protease proteolytic subunit [ Zootermopsis nevadensis ]

    Gene ID: 110826851, updated on 23-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ClpP
    Gene description
    Caseinolytic protease proteolytic subunit
    Locus tag
    L798_02277
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zootermopsis nevadensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ClpP in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019059654.1 (207142..214684, complement)

    NW_019059654.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110826852 Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs adt-2-like Neighboring gene Limb expression 1 family member lowfat Neighboring gene WD repeat domain-containing protein 83 Neighboring gene uncharacterized LOC110826828 Neighboring gene Insulin-like peptide 7

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_019059654 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP-dependent peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of endopeptidase Clp complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ATP-dependent Clp protease proteolytic subunit; ATP-dependent Clp protease proteolytic subunit, mitochondrial
    Names
    Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ZooNev1.0 Primary Assembly

    Genomic

    1. NW_019059654.1 Reference ZooNev1.0 Primary Assembly

      Range
      207142..214684 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022057907.1 → XP_021913599.1  ATP-dependent Clp protease proteolytic subunit isoform X2

      Conserved Domains (1) summary
      PRK00277
      Location:28 → 221
      clpP; ATP-dependent Clp protease proteolytic subunit; Reviewed

    2. XM_022057906.1 → XP_021913598.1  ATP-dependent Clp protease proteolytic subunit isoform X1

      UniProtKB/TrEMBL
      A0A067RHF4
      Conserved Domains (1) summary
      PRK00277
      Location:30 → 223
      clpP; ATP-dependent Clp protease proteolytic subunit; Reviewed

    3. XM_022057909.1 → XP_021913601.1  ATP-dependent Clp protease proteolytic subunit isoform X3

      Conserved Domains (1) summary
      PRK00277
      Location:26 → 219
      clpP; ATP-dependent Clp protease proteolytic subunit; Reviewed

    4. XM_022057910.1 → XP_021913602.1  ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X4

      Conserved Domains (1) summary
      PRK00277
      Location:13 → 206
      clpP; ATP-dependent Clp protease proteolytic subunit; Reviewed
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.