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    CD164 CD164 molecule [ Bos taurus (domestic cattle) ]

    Gene ID: 509820, updated on 12-Oct-2024

    Summary

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    Official Symbol
    CD164provided by VGNC
    Official Full Name
    CD164 moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:27004
    See related
    BGD:BT10907; Ensembl:ENSBTAG00000017992
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CD164 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (40759545..40772112)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene sphingomyelin phosphodiesterase 2 Neighboring gene peptidylprolyl isomerase like 6 Neighboring gene coiled-coil domain containing 162, pseudogene Neighboring gene uncharacterized LOC132346099 Neighboring gene putative uncharacterized protein C6orf183

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC134121

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sialomucin core protein 24
    Names
    CD164 molecule, sialomucin
    MUC-24
    endolyn

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046041.1 → NP_001039506.1  sialomucin core protein 24 precursor

      See identical proteins and their annotated locations for NP_001039506.1

      Status: PROVISIONAL

      Source sequence(s)
      BC110225
      UniProtKB/Swiss-Prot
      Q2YDH0
      Related
      ENSBTAP00000023937.2, ENSBTAT00000023937.3
      Conserved Domains (1) summary
      pfam05283
      Location:65 → 198
      MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      40759545..40772112
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005210777.4 → XP_005210834.1  sialomucin core protein 24 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SNF2
      Related
      ENSBTAP00000084375.1, ENSBTAT00000127805.1
      Conserved Domains (1) summary
      pfam05283
      Location:65 → 186
      MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2YDH0.1 GenPept UniProtKB/Swiss-Prot:Q2YDH0

    Gene LinkOut

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