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    HOM3 HOM3 [ Nakaseomyces glabratus ]

    Gene ID: 2889739, updated on 19-Jun-2024

    Summary

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    Gene symbol
    HOM3
    Gene description
    HOM3
    Locus tag
    GVI51_J02717
    See related
    FungiDB:GVI51_J02717; VEuPathDB:GVI51_J02717
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
    Old locus tag
    CAGL0J02882g
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    Genomic context

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    See HOM3 in Genome Data Viewer
    Location:
    chromosome: J
    Exon count:
    1
    Sequence:
    Chromosome: J; NC_088960.1 (299664..301256, complement)

    Chromosome J - NC_088960.1Genomic Context describing neighboring genes Neighboring gene mitochondrial 37S ribosomal protein bS18m Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene PET117

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088960.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0J02882g
      Ortholog(s) have aspartate kinase activity, role in homoserine biosynthetic process, methionine biosynthetic process, threonine biosynthetic process and cytosol localization

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aspartate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homoserine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lysine biosynthetic process via diaminopimelate IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    HOM3
    XP_447829.1
    • CAGL0J02882g
      Ortholog(s) have aspartate kinase activity, role in homoserine biosynthetic process, methionine biosynthetic process, threonine biosynthetic process and cytosol localization

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088960.1 Reference assembly

      Range
      299664..301256 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_447829.1 → XP_447829.1  HOM3 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_447829.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0D2B2, Q6FPL5
      Conserved Domains (2) summary
      PRK07431
      Location:229 → 499
      PRK07431; aspartate kinase; Provisional
      cl00452
      Location:10 → 324
      AAK; Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that ...
    Nucleotide Protein
    Heading Accession and Version

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