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    si:ch211-198e20.10 si:ch211-198e20.10 [ Danio rerio (zebrafish) ]

    Gene ID: 100000880, updated on 9-Dec-2024

    Summary

    Official Symbol
    si:ch211-198e20.10provided by ZNC
    Official Full Name
    si:ch211-198e20.10provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-131122-20
    See related
    Ensembl:ENSDARG00000089513 AllianceGenome:ZFIN:ZDB-GENE-131122-20
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See si:ch211-198e20.10 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (25007183..25010438, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (25072188..25075371, complement)

    Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137487751 Neighboring gene microRNA 22a Neighboring gene abhydrolase domain containing 15a Neighboring gene uncharacterized LOC137487685 Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 190

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of mitotic cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein si:ch211-198e20.10

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007126.7 Reference GRCz11 Primary Assembly

      Range
      25007183..25010438 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021466433.2XP_021322108.1  uncharacterized protein si:ch211-198e20.10

      UniProtKB/TrEMBL
      A0A8M9P7B6, X1WHE5
      Related
      ENSDARP00000129657.1, ENSDART00000155236.2
      Conserved Domains (1) summary
      cl21453
      Location:304558
      PKc_like; Protein Kinases, catalytic domain

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395323.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      356593..359551 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009291751.4XP_009290026.2  uncharacterized protein si:ch211-198e20.10

      UniProtKB/TrEMBL
      A0A8M3B165
      Conserved Domains (1) summary
      cl21453
      Location:304558
      PKc_like; Protein Kinases, catalytic domain