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    ZBTB7C zinc finger and BTB domain containing 7C [ Phascolarctos cinereus (koala) ]

    Gene ID: 110207981, updated on 15-Mar-2024

    Summary

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    Gene symbol
    ZBTB7C
    Gene description
    zinc finger and BTB domain containing 7C
    See related
    Ensembl:ENSPCIG00000015685
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phascolarctos cinereus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
    Orthologs
    human mouse all
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    Genomic context

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    See ZBTB7C in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018343974.1 (19710642..20236145, complement)

    NW_018343974.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110207900 Neighboring gene uncharacterized LOC110207983 Neighboring gene SMAD family member 2 Neighboring gene cap binding complex dependent translation initiation factor Neighboring gene uncharacterized LOC110207985 Neighboring gene uncharacterized LOC110207987 Neighboring gene SMAD family member 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018343974 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 7C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference phaCin_unsw_v4.1 Primary Assembly

    Genomic

    1. NW_018343974.1 Reference phaCin_unsw_v4.1 Primary Assembly

      Range
      19710642..20236145 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020985797.1 → XP_020841456.1  zinc finger and BTB domain-containing protein 7C isoform X3

      UniProtKB/TrEMBL
      A0A6P5K911
      Conserved Domains (3) summary
      COG5189
      Location:381 → 469
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:395 → 415
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24 → 127
      BTB; BTB/POZ domain

    2. XM_020985794.1 → XP_020841453.1  zinc finger and BTB domain-containing protein 7C isoform X3

      UniProtKB/TrEMBL
      A0A6P5K911
      Conserved Domains (3) summary
      COG5189
      Location:381 → 469
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:395 → 415
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24 → 127
      BTB; BTB/POZ domain

    3. XM_020985795.1 → XP_020841454.1  zinc finger and BTB domain-containing protein 7C isoform X3

      UniProtKB/TrEMBL
      A0A6P5K911
      Conserved Domains (3) summary
      COG5189
      Location:381 → 469
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:395 → 415
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24 → 127
      BTB; BTB/POZ domain

    4. XM_020985796.1 → XP_020841455.1  zinc finger and BTB domain-containing protein 7C isoform X3

      UniProtKB/TrEMBL
      A0A6P5K911
      Conserved Domains (3) summary
      COG5189
      Location:381 → 469
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:395 → 415
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24 → 127
      BTB; BTB/POZ domain

    5. XM_020985792.1 → XP_020841451.1  zinc finger and BTB domain-containing protein 7C isoform X2

      UniProtKB/TrEMBL
      A0A6P5KA55
      Conserved Domains (3) summary
      COG5189
      Location:392 → 480
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:406 → 426
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:35 → 138
      BTB; BTB/POZ domain

    6. XM_020985798.1 → XP_020841457.1  zinc finger and BTB domain-containing protein 7C isoform X3

      UniProtKB/TrEMBL
      A0A6P5K911
      Related
      ENSPCIP00000052845.1, ENSPCIT00000052258.1
      Conserved Domains (3) summary
      COG5189
      Location:381 → 469
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:395 → 415
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24 → 127
      BTB; BTB/POZ domain

    7. XM_020985800.1 → XP_020841459.1  zinc finger and BTB domain-containing protein 7C isoform X3

      UniProtKB/TrEMBL
      A0A6P5K911
      Conserved Domains (3) summary
      COG5189
      Location:381 → 469
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:395 → 415
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24 → 127
      BTB; BTB/POZ domain

    8. XM_020985799.1 → XP_020841458.1  zinc finger and BTB domain-containing protein 7C isoform X3

      UniProtKB/TrEMBL
      A0A6P5K911
      Related
      ENSPCIP00000054295.1, ENSPCIT00000053835.1
      Conserved Domains (3) summary
      COG5189
      Location:381 → 469
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:395 → 415
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24 → 127
      BTB; BTB/POZ domain

    9. XM_020985801.1 → XP_020841460.1  zinc finger and BTB domain-containing protein 7C isoform X3

      UniProtKB/TrEMBL
      A0A6P5K911
      Related
      ENSPCIP00000020630.1, ENSPCIT00000025440.2
      Conserved Domains (3) summary
      COG5189
      Location:381 → 469
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:395 → 415
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24 → 127
      BTB; BTB/POZ domain

    10. XM_020985802.1 → XP_020841461.1  zinc finger and BTB domain-containing protein 7C isoform X4

      UniProtKB/TrEMBL
      A0A6P5KA66
      Related
      ENSPCIP00000046934.1, ENSPCIT00000063322.1
      Conserved Domains (3) summary
      sd00017
      Location:379 → 399
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:36 → 139
      BTB; BTB/POZ domain
      pfam13465
      Location:420 → 444
      zf-H2C2_2; Zinc-finger double domain

    11. XM_020985791.1 → XP_020841450.1  zinc finger and BTB domain-containing protein 7C isoform X1

      UniProtKB/TrEMBL
      A0A6P5K7W3
      Conserved Domains (3) summary
      COG5189
      Location:393 → 481
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:407 → 427
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:36 → 139
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version

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