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    znhit2 zinc finger, HIT-type containing 2 [ Danio rerio (zebrafish) ]

    Gene ID: 777606, updated on 9-Dec-2024

    Summary

    Official Symbol
    znhit2provided by ZNC
    Official Full Name
    zinc finger, HIT-type containing 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-061103-46
    See related
    Ensembl:ENSDARG00000030805 AllianceGenome:ZFIN:ZDB-GENE-061103-46
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:152924
    Summary
    Is expressed in telencephalon. Orthologous to human ZNHIT2 (zinc finger HIT-type containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See znhit2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (26982254..26985231, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (27020541..27023518, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene VPS51 subunit of GARP complex Neighboring gene transmembrane 7 superfamily member 2 Neighboring gene mitochondrial ribosomal protein L49 Neighboring gene zgc:193742 Neighboring gene FAU ubiquitin like and ribosomal protein S30 fusion b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    zinc finger HIT domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077618.1NP_001071086.1  zinc finger HIT domain-containing protein 2

      See identical proteins and their annotated locations for NP_001071086.1

      Status: PROVISIONAL

      Source sequence(s)
      BC125835
      UniProtKB/TrEMBL
      A0JMD6
      Related
      ENSDARP00000050584.5, ENSDART00000050585.6
      Conserved Domains (1) summary
      pfam04438
      Location:78104
      zf-HIT; HIT zinc finger

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      26982254..26985231 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394787.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      205448..208439 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395289.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      7667..10644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)