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    T20F10.2 CAP-Gly domain-containing linker protein 1-like;Leucine zipper protein 1;Si:ch211-1a19.3 [ Caenorhabditis elegans ]

    Gene ID: 172897, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T20F10.2
    Official Full Name
    CAP-Gly domain-containing linker protein 1-like;Leucine zipper protein 1;Si:ch211-1a19.3
    Primary source
    WormBase:WBGene00011864
    Locus tag
    CELE_T20F10.2
    See related
    AllianceGenome:WB:WBGene00011864
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T20F10.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (10298140..10300598)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene 63 kDa sperm flagellar membrane protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Serine/threonine-protein kinase WARTS homolog Neighboring gene SEC7 domain-containing protein Neighboring gene ncRNA Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    CAP-Gly domain-containing linker protein 1-like;Leucine zipper protein 1;Si:ch211-1a19.3
    NP_001040684.1
    • Confirmed by transcript evidence
    NP_001040686.1
    • Confirmed by transcript evidence
    NP_001367140.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      10298140..10300598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001047219.4 → NP_001040684.1  Si:ch211-1a19.3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040684.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O18092
      Conserved Domains (1) summary
      TIGR02168
      Location:50 → 259
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. NM_001381192.1 → NP_001367140.1  Leucine zipper protein 1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q1ZXS4
      Conserved Domains (1) summary
      COG1196
      Location:50 → 241
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. NM_001047221.3 → NP_001040686.1  CAP-Gly domain-containing linker protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040686.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q1ZXS3
    Nucleotide Protein
    Heading Accession and Version

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