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    ARNT aryl hydrocarbon receptor nuclear translocator [ Meleagris gallopavo (turkey) ]

    Gene ID: 100542194, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ARNT
    Gene description
    aryl hydrocarbon receptor nuclear translocator
    See related
    Ensembl:ENSMGAG00000000943
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Meleagris gallopavo
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
    Orthologs
    human mouse all
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    Genomic context

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    See ARNT in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Turkey_5.1 (GCF_000146605.3) 27 NC_015037.2 (1128500..1144628, complement)
    Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 27 NC_015037.1 (651136..680629, complement)

    Chromosome 27 - NC_015037.2Genomic Context describing neighboring genes Neighboring gene cathepsin S Neighboring gene cathepsin K Neighboring gene SET domain bifurcated histone lysine methyltransferase 1 Neighboring gene ceramide synthase 2 Neighboring gene MINDY lysine 48 deubiquitinase 1 Neighboring gene prune exopolyphosphatase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of aryl hydrocarbon receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aryl hydrocarbon receptor nuclear translocator

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Turkey_5.1 Primary Assembly

    Genomic

    1. NC_015037.2 Reference Turkey_5.1 Primary Assembly

      Range
      1128500..1144628 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010723962.3 → XP_010722264.1  aryl hydrocarbon receptor nuclear translocator isoform X3

      UniProtKB/TrEMBL
      A0A803Y353
      Related
      ENSMGAP00000026200.1, ENSMGAT00000027422.1
      Conserved Domains (4) summary
      PRK12799
      Location:630 → 757
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:205 → 332
      PAS; PAS fold
      pfam14598
      Location:425 → 525
      PAS_11; PAS domain
      cd18947
      Location:128 → 192
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    2. XM_019623134.1 → XP_019478679.1  aryl hydrocarbon receptor nuclear translocator isoform X10

      UniProtKB/TrEMBL
      G1MQP1
      Conserved Domains (4) summary
      PRK12799
      Location:505 → 632
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:139 → 244
      PAS; PAS fold
      pfam14598
      Location:337 → 437
      PAS_11; PAS domain
      cd18947
      Location:62 → 126
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    3. XM_010723968.2 → XP_010722270.1  aryl hydrocarbon receptor nuclear translocator isoform X11

      UniProtKB/TrEMBL
      G1MQP1
      Conserved Domains (4) summary
      PRK12799
      Location:542 → 668
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:139 → 244
      PAS; PAS fold
      pfam14598
      Location:337 → 437
      PAS_11; PAS domain
      cd18947
      Location:62 → 126
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    4. XM_010723966.2 → XP_010722268.1  aryl hydrocarbon receptor nuclear translocator isoform X8

      UniProtKB/TrEMBL
      G1MQP1
      Conserved Domains (4) summary
      PRK12799
      Location:542 → 669
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:139 → 244
      PAS; PAS fold
      pfam14598
      Location:337 → 437
      PAS_11; PAS domain
      cd18947
      Location:62 → 126
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    5. XM_010723961.2 → XP_010722263.1  aryl hydrocarbon receptor nuclear translocator isoform X2

      UniProtKB/TrEMBL
      G1MQP1
      Related
      ENSMGAP00000033075.1, ENSMGAT00000021170.1
      Conserved Domains (4) summary
      PRK12799
      Location:564 → 691
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:139 → 266
      PAS; PAS fold
      pfam14598
      Location:359 → 459
      PAS_11; PAS domain
      cd18947
      Location:62 → 126
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    6. XM_010723967.2 → XP_010722269.1  aryl hydrocarbon receptor nuclear translocator isoform X9

      UniProtKB/TrEMBL
      G1MQP1
      Conserved Domains (4) summary
      PRK12799
      Location:520 → 647
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:154 → 259
      PAS; PAS fold
      pfam14598
      Location:352 → 452
      PAS_11; PAS domain
      cd18947
      Location:77 → 141
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    7. XM_010723964.2 → XP_010722266.1  aryl hydrocarbon receptor nuclear translocator isoform X6

      UniProtKB/TrEMBL
      G1MQP1
      Related
      ENSMGAP00000030772.1, ENSMGAT00000023649.1
      Conserved Domains (4) summary
      PRK12799
      Location:557 → 684
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:154 → 259
      PAS; PAS fold
      pfam14598
      Location:352 → 452
      PAS_11; PAS domain
      cd18947
      Location:77 → 141
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    8. XM_010723965.2 → XP_010722267.1  aryl hydrocarbon receptor nuclear translocator isoform X7

      UniProtKB/TrEMBL
      G1MQP1
      Conserved Domains (4) summary
      PRK12799
      Location:542 → 669
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:154 → 281
      PAS; PAS fold
      pfam14598
      Location:374 → 474
      PAS_11; PAS domain
      cd18947
      Location:77 → 141
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    9. XM_010723963.2 → XP_010722265.1  aryl hydrocarbon receptor nuclear translocator isoform X5

      UniProtKB/TrEMBL
      G1MQP1
      Conserved Domains (4) summary
      PRK14951
      Location:604 → 763
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
      pfam00989
      Location:154 → 281
      PAS; PAS fold
      pfam14598
      Location:374 → 474
      PAS_11; PAS domain
      cd18947
      Location:77 → 141
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    10. XM_019623133.1 → XP_019478678.1  aryl hydrocarbon receptor nuclear translocator isoform X4

      UniProtKB/TrEMBL
      G1MQP1
      Conserved Domains (4) summary
      pfam00989
      Location:154 → 281
      PAS; PAS fold
      pfam09770
      Location:587 → 746
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14598
      Location:374 → 474
      PAS_11; PAS domain
      cd18947
      Location:77 → 141
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins

    11. XM_010723960.2 → XP_010722262.1  aryl hydrocarbon receptor nuclear translocator isoform X1

      UniProtKB/TrEMBL
      G1MQP1
      Related
      ENSMGAP00000000404.3, ENSMGAT00000001041.3
      Conserved Domains (4) summary
      PRK12799
      Location:579 → 705
      motB; flagellar motor protein MotB; Reviewed
      pfam00989
      Location:154 → 281
      PAS; PAS fold
      pfam14598
      Location:374 → 474
      PAS_11; PAS domain
      cd18947
      Location:77 → 141
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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