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    HQN82_RS05235 LacI family transcriptional regulator [ Agrobacterium pusense ]

    Gene ID: 61454711, updated on 13-May-2024

    Summary

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    Gene symbol
    HQN82_RS05235
    Gene description
    LacI family transcriptional regulator
    Locus tag
    HQN82_RS05235
    Gene type
    protein coding
    Organism
    Agrobacterium pusense (strain: 76, nat-host: Fusarium oxysporum f. sp. cucumerinum)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium
    Old locus tag
    HQN82_05235
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    Genomic context

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    Location:
    chromosome: R76C1

    R76C1 - NZ_CP053856.1Genomic Context describing neighboring genes Neighboring gene L-glyceraldehyde 3-phosphate reductase Neighboring gene glycoside hydrolase family 2 protein Neighboring gene zinc ABC transporter substrate-binding protein ZnuA Neighboring gene zinc ABC transporter ATP-binding protein ZnuC Neighboring gene zinc ABC transporter permease subunit ZnuB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP053856.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LacI family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP053856.1 Reference assembly

      Range
      1073426..1074478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_034495714.1 MULTISPECIES: LacI family transcriptional regulator [Rhizobium/Agrobacterium group]

      See identical proteins and their annotated locations for WP_034495714.1

      UniProtKB/TrEMBL
      A0A4S1H3G6, A0A9W5AY91, A0A9X0PMM6
      Conserved Domains (2) summary
      cd20009
      Location:79 → 343
      PBP1_RafR-like; Ligand-binding domain of DNA transcription repressor specific for raffinose (RafR) and similar proteins
      cl22854
      Location:20 → 85
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
    Nucleotide Protein
    Heading Accession and Version