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    Smp_062270 12.5 kDa retinal tissue protein (Rtp12.5),putative [ Schistosoma mansoni ]

    Gene ID: 8347664, updated on 16-Nov-2023

    Summary

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    Gene symbol
    Smp_062270
    Gene description
    12.5 kDa retinal tissue protein (Rtp12.5),putative
    Locus tag
    Smp_062270
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schistosoma mansoni (strain: Puerto Rico)
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
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    Genomic context

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    Location:
    chromosome: 2, map: unlocalized
    Exon count:
    4

    NW_017386003.1Genomic Context describing neighboring genes Neighboring gene ribosomal RNA Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type II, putative Neighboring gene uridine cytidine kinase I, putative Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017386003.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of DRM complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    12.5 kDa retinal tissue protein (Rtp12.5),putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_017386003.1 Reference assembly

      Range
      103642..104076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018791490.1 → XP_018645336.1  12.5 kDa retinal tissue protein (Rtp12.5),putative [Schistosoma mansoni]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G4LVN8
    Protein Accession Links
    GenPept Link UniProtKB Link
    CCD58977.1

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    Molecular Biology Databases