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    NAC099 NAC domain containing protein 99 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835763, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NAC099
    Official Full Name
    NAC domain containing protein 99
    Primary source
    TAIR:AT5G56620
    Locus tag
    AT5G56620
    See related
    Araport:AT5G56620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    anac099; MIK19.7; MIK19_7; NAC domain containing protein 99
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    Genomic context

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    See NAC099 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (22917934..22921499, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene profilin Neighboring gene pseudo Neighboring gene Phosphotyrosine protein phosphatases superfamily protein Neighboring gene ncRNA Neighboring gene phosphofructokinase 7 Neighboring gene myo-inositol oxygenase 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Xylem vessel-specific SND5 and its homologs regulate secondary wall biosynthesis through activating secondary wall NAC binding elements. Zhong R, et al. New Phytol, 2021 Aug. PMID 33908063
    2. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NAC domain containing protein 99
    NP_200473.1
    • NAC domain containing protein 99 (NAC099); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 75 (TAIR:AT4G29230.1); Has 2210 Blast hits to 2204 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22917934..22921499 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345209.1 → NP_001330096.1  NAC domain containing protein 99 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9R1, A0A5S9YEM7

    2. NM_001345208.1 → NP_001330095.1  NAC domain containing protein 99 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9R4, A0A5S9YEM7
      Conserved Domains (1) summary
      pfam02365
      Location:44 → 194
      NAM; No apical meristem (NAM) protein

    3. NM_125045.1 → NP_200473.1  NAC domain containing protein 99 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200473.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULY6, Q9FJU6
      Conserved Domains (1) summary
      pfam02365
      Location:46 → 98
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

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