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    Ribonuclease P protein subunit P38-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835381, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribonuclease P protein subunit P38-like protein
    Primary source
    TAIR:AT5G53020
    Locus tag
    AT5G53020
    See related
    Araport:AT5G53020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MNB8.8; MNB8_8
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (21498379..21502500)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SNARE-like superfamily protein Neighboring gene 2A phosphatase associated protein of 46 kD Neighboring gene calcium-transporting ATPase Neighboring gene uncharacterized protein Neighboring gene RWP-RK domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    • At5g53020_Arabidopsis_lyrata_ssp._lyrata_CAN10 (e-PCR)
    • At5g53020_Arabidopsis_lyrata_ssp._petraea_GER12 (e-PCR)
    NM_001345020.1
    NM_001345021.1
    NM_001345025.1
    NM_001345026.1
    NM_001345027.1
    NM_001345028.1
    NM_124681.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ribonuclease P protein subunit P38-like protein
    NP_001318792.1
    • Ribonuclease P protein subunit P38-related; BEST Arabidopsis thaliana protein match is: Ribonuclease P protein subunit P38-related (TAIR:AT3G45900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21498379..21502500
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345022.1 → NP_001330311.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAF1, A0A5S9YDJ0

    2. NM_001345023.1 → NP_001330312.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ0, Q9LVV0

    3. NM_001345024.1 → NP_001330316.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ0, Q9LVV0

    4. NM_001345020.1 → NP_001318792.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ0, Q9LVV0

    5. NM_124681.4 → NP_200114.3  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200114.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ0, Q9LVV0
      Conserved Domains (1) summary
      TIGR02168
      Location:32 → 254
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    6. NM_001345027.1 → NP_001330318.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ0, Q9LVV0

    7. NM_001345025.1 → NP_001330315.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UID6, A0A1P8BAF7, A0A5S9YDJ0

    8. NM_001345026.1 → NP_001330317.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UID6, A0A1P8BAF7, A0A5S9YDJ0

    9. NM_001345028.1 → NP_001330313.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ0, Q9LVV0

    10. NM_001345021.1 → NP_001330314.1  Ribonuclease P protein subunit P38-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ0, Q9LVV0
    Nucleotide Protein
    Heading Accession and Version

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