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    GSL09 glucan synthase-like 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833654, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GSL09
    Official Full Name
    glucan synthase-like 9
    Primary source
    TAIR:AT5G36870
    Locus tag
    AT5G36870
    See related
    Araport:AT5G36870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGSL09; atgsl9; F5H8.14; F5H8_14; glucan synthase-like 9; gsl09
    Summary
    encodes a gene similar to callose synthase
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    Genomic context

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    See GSL09 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    42
    Sequence:
    Chromosome: 5; NC_003076.8 (14518008..14534060)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene acetyl-CoA synthetase Neighboring gene beta glucosidase 42

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A user-friendly platform for yeast two-hybrid library screening using next generation sequencing. Erffelinck ML, et al. PLoS One, 2018. PMID 30576311, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1,3-beta-D-glucan synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables 1,3-beta-D-glucan synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in (1->3)-beta-D-glucan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of 1,3-beta-D-glucan synthase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glucan synthase-like 9
    NP_198503.3
    • glucan synthase-like 9 (GSL09); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: shoot apex, petal, root, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      14518008..14534060
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344151.1 → NP_001329982.1  glucan synthase-like 9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9E7, A0A5S9Y8I9

    2. NM_001344150.1 → NP_001329981.1  glucan synthase-like 9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9B7, A0A5S9Y8I9

    3. NM_001344152.1 → NP_001329979.1  glucan synthase-like 9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9B7, A0A5S9Y8I9

    4. NM_123045.4 → NP_198503.3  glucan synthase-like 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198503.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LTG5
      UniProtKB/TrEMBL
      A0A5S9Y8I9
      Conserved Domains (2) summary
      pfam02364
      Location:985 → 1695
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam14288
      Location:329 → 440
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

    5. NM_001344153.1 → NP_001329980.1  glucan synthase-like 9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9D3, A0A5S9Y8I9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LTG5.2

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