U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Acetamidase/Formamidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829911, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Acetamidase/Formamidase family protein
    Primary source
    TAIR:AT4G37560
    Locus tag
    AT4G37560
    See related
    Araport:AT4G37560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19F18.50; F19F18_50
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (17646408..17648684)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene LOB domain-containing protein 39 Neighboring gene Acetamidase/Formamidase family protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001342447.1
    NM_119920.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Acetamidase/Formamidase family protein
    NP_568029.1
    • Acetamidase/Formamidase family protein; FUNCTIONS IN: formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetamidase/Formamidase (InterPro:IPR004304); BEST Arabidopsis thaliana protein match is: Acetamidase/Formamidase family protein (TAIR:AT4G37550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17646408..17648684
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119920.3 → NP_568029.1  Acetamidase/Formamidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568029.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8H1G4, Q94CA8
      Conserved Domains (1) summary
      pfam03069
      Location:72 → 402
      FmdA_AmdA; Acetamidase/Formamidase family

    2. NM_001342447.1 → NP_001327986.1  Acetamidase/Formamidase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V261, A0A1P8B392
      Conserved Domains (1) summary
      pfam03069
      Location:67 → 401
      FmdA_AmdA; Acetamidase/Formamidase family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.