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    shugoshin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823631, updated on 18-Sep-2024

    Summary

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    Official Full Name
    shugoshin
    Primary source
    TAIR:AT3G44960
    Locus tag
    AT3G44960
    See related
    Araport:AT3G44960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (16427581..16429403)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene glycine-rich protein Neighboring gene tRNA-Gly Neighboring gene Cytochrome P450 superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in maintenance of meiotic sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in meiotic sister chromatid segregation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    shugoshin
    NP_001319686.1
    • unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      16427581..16429403
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339181.1 → NP_001327664.1  shugoshin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKK9, A0A1I9LT08, A0A5S9XI21

    2. NM_001339182.1 → NP_001327667.1  shugoshin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKK9, A0A1I9LT11, A0A5S9XI21

    3. NM_001339180.1 → NP_001319686.1  shugoshin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKK9, A0A5S9XI21, F4J4B9

    4. NM_001339183.1 → NP_001327666.1  shugoshin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LT10, Q9LXH9

    5. NM_001339184.1 → NP_001327665.1  shugoshin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LT09, Q9LXH9
    Nucleotide Protein
    Heading Accession and Version

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