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    Mevalonate/galactokinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823331, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mevalonate/galactokinase family protein
    Primary source
    TAIR:AT3G42850
    Locus tag
    AT3G42850
    See related
    Araport:AT3G42850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    28
    Sequence:
    Chromosome: 3; NC_003074.8 (14940002..14945319, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene zinc knuckle (CCHC-type) family protein Neighboring gene heat shock protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of arabinokinase in arabinose toxicity in plants. Behmüller R, et al. Plant J, 2016 Aug. PMID 27145098
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables L-arabinokinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within arabinose metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Mevalonate/galactokinase family protein
    NP_189871.1
    • Mevalonate/galactokinase family protein; FUNCTIONS IN: kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding; INVOLVED IN: metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GHMP kinase (InterPro:IPR006204), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Galactokinase, glycosyltransferase (InterPro:IPR012369), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 3577 Blast hits to 3572 proteins in 1442 species: Archae - 89; Bacteria - 2609; Metazoa - 174; Fungi - 132; Plants - 130; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      14940002..14945319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339089.1 → NP_001327277.1  Mevalonate/galactokinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEG1, A0A1I9LRU1, A0A654FI53

    2. NM_114153.2 → NP_189871.1  Mevalonate/galactokinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189871.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEG1, A0A654FI53, Q9M1M0
      Conserved Domains (5) summary
      COG0153
      Location:468 → 952
      GalK; Galactokinase [Carbohydrate transport and metabolism]
      pfam00288
      Location:617 → 685
      GHMP_kinases_N; GHMP kinases N terminal domain
      pfam08544
      Location:853 → 934
      GHMP_kinases_C; GHMP kinases C terminal
      pfam10509
      Location:480 → 521
      GalKase_gal_bdg; Galactokinase galactose-binding signature
      cl10013
      Location:14 → 226
      Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
    Nucleotide Protein
    Heading Accession and Version

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