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    transcription factor SCREAM-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818637, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transcription factor SCREAM-like protein
    Primary source
    TAIR:AT2G40435
    Locus tag
    AT2G40435
    See related
    Araport:AT2G40435
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T2P4.23
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (16886767..16889243)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Ca(2+)-dependent nuclease family protein Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene Nop53 protein Neighboring gene BTB/POZ domain protein Neighboring gene ncRNA Neighboring gene BTB/POZ domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_001336840.1
    NM_129604.2

    General protein information

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    Preferred Names
    transcription factor SCREAM-like protein
    NP_565932.1
    • BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16886767..16889243
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336839.1 → NP_001324739.1  transcription factor SCREAM-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B133

    2. NM_129604.2 → NP_565932.1  transcription factor SCREAM-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565932.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VRF4, Q8RUZ5
      Conserved Domains (2) summary
      cd04873
      Location:85 → 147
      ACT_UUR-ACR-like; ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD
      cl00081
      Location:6 → 50
      bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily

    3. NM_001336840.1 → NP_001324738.1  transcription factor SCREAM-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B120
    Nucleotide Protein
    Heading Accession and Version

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