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    GRXS13 Glutaredoxin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839392, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GRXS13
    Official Full Name
    Glutaredoxin family protein
    Primary source
    TAIR:AT1G03850
    Locus tag
    AT1G03850
    See related
    Araport:AT1G03850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGRXS13; F21M11.22; F21M11_22; glutaredoxin 13
    Summary
    Encodes glutaredoxin ATGRXS13, required to facilitate Botrytis cinerea infection of Arabidopsis thaliana plants. Sylvain La Camera et al (2011, PMID:21756272) reported a third splice variant in addition to the two annotated in TAIR10.
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    Genomic context

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    See GRXS13 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (975871..977911, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene guanylate-binding family protein Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene prohibitin 2 Neighboring gene FASCICLIN-like arabinoogalactan 9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Glutaredoxin GRXS13 plays a key role in protection against photooxidative stress in Arabidopsis. Laporte D, et al. J Exp Bot, 2012 Jan. PMID 21963612, Free PMC Article
    2. The glutaredoxin ATGRXS13 is required to facilitate Botrytis cinerea infection of Arabidopsis thaliana plants. La Camera S, et al. Plant J, 2011 Nov. PMID 21756272
    3. Immediate-early and delayed cytokinin response genes of Arabidopsis thaliana identified by genome-wide expression profiling reveal novel cytokinin-sensitive processes and suggest cytokinin action through transcriptional cascades. Brenner WG, et al. Plant J, 2005 Oct. PMID 16212609
    4. Repression of the Arabidopsis thaliana jasmonic acid/ethylene-induced defense pathway by TGA-interacting glutaredoxins depends on their C-terminal ALWL motif. Zander M, et al. Mol Plant, 2012 Jul. PMID 22207719
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_100265.3
    NM_179255.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cytokinin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to photooxidative stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Glutaredoxin family protein
    NP_563691.1
    • Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: response to cytokinin stimulus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G28480.1); Has 646 Blast hits to 646 proteins in 57 species: Archae - 0; Bacteria - 6; Metazoa - 30; Fungi - 15; Plants - 593; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_849586.1
    • Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: response to cytokinin stimulus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G28480.1); Has 446 Blast hits to 446 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 5; Plants - 435; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      975871..977911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331442.1 → NP_001321276.1  Glutaredoxin family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQF1
      Conserved Domains (1) summary
      cl00388
      Location:56 → 106
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    2. NM_179255.3 → NP_849586.1  Glutaredoxin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849586.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9SG84
      Conserved Domains (1) summary
      TIGR02189
      Location:56 → 136
      GlrX-like_plant; Glutaredoxin-like family

    3. NM_100265.3 → NP_563691.1  Glutaredoxin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563691.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C1JGQ8, Q84TF4, Q94CA3, Q9ZWA7
      UniProtKB/TrEMBL
      A0A178W2Q3, A0A5S9SG84
      Conserved Domains (1) summary
      TIGR02189
      Location:56 → 150
      GlrX-like_plant; Glutaredoxin-like family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84TF4.2

    Gene LinkOut

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