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    SEMA6C semaphorin 6C [ Rhinopithecus bieti (black snub-nosed monkey) ]

    Gene ID: 108533246, updated on 1-Aug-2024

    Summary

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    Gene symbol
    SEMA6C
    Gene description
    semaphorin 6C
    See related
    Ensembl:ENSRBIG00000041675
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhinopithecus bieti
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
    Orthologs
    human mouse all
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    Genomic context

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    See SEMA6C in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current ASM169854v1 (GCF_001698545.1) Unplaced Scaffold NW_016806834.1 (1269305..1285197)

    NW_016806834.1Genomic Context describing neighboring genes Neighboring gene sodium channel modifier 1 Neighboring gene LysM domain containing 1 Neighboring gene TNF alpha induced protein 8 like 2 Neighboring gene GA binding protein transcription factor subunit beta 2 Neighboring gene MLLT11 transcription factor 7 cofactor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_016806834.1 Unplaced Scaffold Reference ASM169854v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemorepellent activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables semaphorin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of axon extension involved in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in semaphorin-plexin signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    semaphorin-6C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhinopithecus bieti Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM169854v1 Primary Assembly

    Genomic

    1. NW_016806834.1 Reference ASM169854v1 Primary Assembly

      Range
      1269305..1285197
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017877739.1 → XP_017733228.1  semaphorin-6C isoform X1

      UniProtKB/TrEMBL
      A0A2K6MKU7, A0A2K6MKY3, A0A2K6MKZ7, A0A2K6ML66, A0AAJ7MJW3
      Related
      ENSRBIP00000036418.1, ENSRBIT00000060424.1

    2. XM_017877738.1 → XP_017733227.1  semaphorin-6C isoform X1

      UniProtKB/TrEMBL
      A0A2K6MKU7, A0A2K6MKY3, A0A2K6MKZ7, A0A2K6ML66, A0AAJ7MJW3
      Related
      ENSRBIP00000036455.1, ENSRBIT00000060461.1

    3. XM_017877740.1 → XP_017733229.1  semaphorin-6C isoform X2

      UniProtKB/TrEMBL
      A0A2K6MKW9, A0A2K6MKZ7, A0AAJ7MKF9
      Related
      ENSRBIP00000036419.1, ENSRBIT00000060425.1

    4. XM_017877741.1 → XP_017733230.1  semaphorin-6C isoform X3

      UniProtKB/TrEMBL
      A0A2K6MKY3, A0A2K6MKZ7, A0A2K6ML66, A0AAJ7HQ46
    Nucleotide Protein
    Heading Accession and Version

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