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    TAO1 target of AVRB operation1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834478, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TAO1
    Official Full Name
    target of AVRB operation1
    Primary source
    TAIR:AT5G44510
    Locus tag
    AT5G44510
    See related
    Araport:AT5G44510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MFC16.19; MFC16_19; target of AVRB operation1
    Summary
    Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB.
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    Genomic context

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    See TAO1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (17929558..17934222, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein Neighboring gene ECA1 gametogenesis related family protein Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene NagB/RpiA/CoA transferase-like superfamily protein Neighboring gene Subtilase family protein Neighboring gene Tapetum specific protein TAP35/TAP44

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis TAO1 is a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB. Eitas TK, et al. Proc Natl Acad Sci U S A, 2008 Apr 29. PMID 18424557, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. TAO1 Encodes a TIR-NB-LRR Protein Required for AvrB-Induced Chlorosis in rpm1 Host Plants. [TAO1]
      Title: Arabidopsis TAO1 is a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001344554.1
    NM_123818.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables NAD+ nucleotidase, cyclic ADP-ribose generating IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    target of AVRB operation1
    NP_199264.1
    • target of AVRB operation1 (TAO1); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: defense response to bacterium, defense response; LOCATED IN: intrinsic to membrane, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 64497 Blast hits to 28534 proteins in 952 species: Archae - 44; Bacteria - 3015; Metazoa - 6184; Fungi - 445; Plants - 50575; Viruses - 21; Other Eukaryotes - 4213 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17929558..17934222 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344552.1 → NP_001330713.1  target of AVRB operation1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBM6, A7LKN1

    2. NM_001344553.1 → NP_001330714.1  target of AVRB operation1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBN1, A7LKN1

    3. NM_123818.2 → NP_199264.1  target of AVRB operation1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199264.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FI14
      UniProtKB/TrEMBL
      A0A654G8G8
      Conserved Domains (5) summary
      cd09293
      Location:704 → 911
      AMN1; Antagonist of mitotic exit network protein 1
      PLN03210
      Location:36 → 1062
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:659 → 681
      LRR_RI; leucine-rich repeat [structural motif]
      pfam01582
      Location:42 → 199
      TIR; TIR domain
      pfam07725
      Location:635 → 653
      LRR_3; Leucine Rich Repeat

    4. NM_001344554.1 → NP_001330712.1  target of AVRB operation1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBP6, A7LKN1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FI14.1

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