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    SYP73 syntaxin of plants 73 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825318, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SYP73
    Official Full Name
    syntaxin of plants 73
    Primary source
    TAIR:AT3G61450
    Locus tag
    AT3G61450
    See related
    Araport:AT3G61450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSYP73; syntaxin of plants 73
    Summary
    syntaxin of plants 73 (SYP73)
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    Genomic context

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    See SYP73 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (22738353..22740112)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene plasma membrane intrinsic protein 1A Neighboring gene cysteine synthase C1 Neighboring gene brassinosteroid-responsive RING-H2 Neighboring gene photosystem I light harvesting complex protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SYP73 Anchors the ER to the Actin Cytoskeleton for Maintenance of ER Integrity and Streaming in Arabidopsis. Cao P, et al. Curr Biol, 2016 Dec 5. PMID 27866894
    2. The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors. Sanderfoot AA, et al. Plant Physiol, 2000 Dec. PMID 11115874, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203224.2
    NM_001340100.1
    NM_001340101.1
    NM_001340102.1
    NM_001340103.1
    NM_116010.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within intracellular protein transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of filamentous actin IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    syntaxin of plants 73
    NP_001190153.1
    • syntaxin of plants 73 (SYP73); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 71 (TAIR:AT3G09740.1).
    NP_567114.1
    • syntaxin of plants 73 (SYP73); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 71 (TAIR:AT3G09740.1); Has 361 Blast hits to 359 proteins in 120 species: Archae - 8; Bacteria - 14; Metazoa - 56; Fungi - 49; Plants - 132; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22738353..22740112
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203224.2 → NP_001190153.1  syntaxin of plants 73 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190153.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XNK5, A0A7G2EZ63, F4JEA3
      Conserved Domains (1) summary
      cd15841
      Location:175 → 230
      SNARE_Qc; SNARE motif, subgroup Qc

    2. NM_001340100.1 → NP_001326526.1  syntaxin of plants 73 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPJ7, A0A5S9XNK5

    3. NM_001340101.1 → NP_001326527.1  syntaxin of plants 73 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPJ8, A0A5S9XNK5

    4. NM_001340102.1 → NP_001326528.1  syntaxin of plants 73 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPJ9

    5. NM_001340103.1 → NP_001326529.1  syntaxin of plants 73 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPK0, A0A5S9XNK5, A0A654FJQ8
      Conserved Domains (1) summary
      cd15841
      Location:175 → 230
      SNARE_Qc; SNARE motif, subgroup Qc

    6. NM_116010.1 → NP_567114.1  syntaxin of plants 73 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567114.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94KK5, Q9M321
      UniProtKB/TrEMBL
      A0A178VEJ3, A0A5S9XNK5
      Conserved Domains (1) summary
      cd15841
      Location:179 → 229
      SNARE_Qc; SNARE motif, subgroup Qc
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94KK5.1

    Gene LinkOut

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