rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rhno1provided by ZNC
Official Full Name: RAD9-HUS1-RAD1 interacting nuclear orphan 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-141219-42
See related: Ensembl:ENSDARG00000091640 AllianceGenome:ZFIN:ZDB-GENE-141219-42
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: si:ch73-352p4.5
Summary: Predicted to be involved in DNA damage checkpoint signaling and recombinational repair. Predicted to act upstream of or within cellular response to ionizing radiation. Predicted to be active in chromosome and nucleus. Orthologous to human RHNO1 (RAD9-HUS1-RAD1 interacting nuclear orphan 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	4	NC_007115.7 (5832312..5834648)
105	previous assembly	GRCz10 (GCF_000002035.5)	4	NC_007115.6 (5823742..5826078)

Chromosome 4 - NC_007115.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in DNA damage checkpoint signaling	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within DNA damage checkpoint signaling	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cellular response to ionizing radiation	IEA Inferred from Electronic Annotation more info
involved_in recombinational repair	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in chromosome	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: RAD9, HUS1, RAD1-interacting nuclear orphan protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001328034.1 → NP_001314963.1 RAD9, HUS1, RAD1-interacting nuclear orphan protein 1

Status: VALIDATED

Source sequence(s)

CB359092, CU571169

UniProtKB/TrEMBL

A0A8M1P8P6, E7F2N1

Related

ENSDARP00000107548.2, ENSDART00000121743.3

Conserved Domains (1) summary

pfam15319
Location:1 → 282

RHINO; RAD9, RAD1, HUS1-interacting nuclear orphan protein