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    sp3a sp3a transcription factor [ Sinocyclocheilus rhinocerous ]

    Gene ID: 107742953, updated on 14-Mar-2024

    Summary

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    Gene symbol
    sp3a
    Gene description
    sp3a transcription factor
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sinocyclocheilus rhinocerous
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
    Orthologs
    human zebrafish all
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    Genomic context

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    See sp3a in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015632734.1 (924246..945668, complement)

    NW_015632734.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 20a Neighboring gene cell division cycle-associated protein 7-like Neighboring gene uncharacterized LOC107742956 Neighboring gene transcription factor Sp9-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015632734.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor Sp3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SAMN03320098_v1.1 Primary Assembly

    Genomic

    1. NW_015632734.1 Reference SAMN03320098_v1.1 Primary Assembly

      Range
      924246..945668 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016556041.1 → XP_016411527.1  transcription factor Sp3-like isoform X3

      UniProtKB/TrEMBL
      A0A673FLS9

    2. XM_016556040.1 → XP_016411526.1  transcription factor Sp3-like isoform X2

      UniProtKB/TrEMBL
      A0A673FUM7

    3. XM_016556039.1 → XP_016411525.1  transcription factor Sp3-like isoform X1

      UniProtKB/TrEMBL
      A0A673FUM7
    Nucleotide Protein
    Heading Accession and Version

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