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    LOC107366369 solute carrier family 41 member 2 [ Tetranychus urticae (two-spotted spider mite) ]

    Gene ID: 107366369, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC107366369
    Gene description
    solute carrier family 41 member 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tetranychus urticae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus
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    Genomic context

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    See LOC107366369 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current ASM23943v1 (GCF_000239435.1) Unplaced Scaffold NW_015449930.1 (98145..105048)

    NW_015449930.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107366352 Neighboring gene kinesin-like protein 98A Neighboring gene GTP 3',8-cyclase, mitochondrial Neighboring gene U7 snRNA-associated Sm-like protein LSm11 Neighboring gene diuretic hormone receptor Neighboring gene uncharacterized LOC107363027 Neighboring gene RAC serine/threonine-protein kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015449930 Unplaced Scaffold Reference ASM23943v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic cation transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 41 member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tetranychus urticae Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM23943v1 Primary Assembly

    Genomic

    1. NW_015449930.1 Reference ASM23943v1 Primary Assembly

      Range
      98145..105048
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015933992.2 → XP_015789478.1  solute carrier family 41 member 2

      UniProtKB/TrEMBL
      T1JPN7
      Conserved Domains (1) summary
      pfam01769
      Location:343 → 484
      MgtE; Divalent cation transporter

    2. XM_015933975.2 → XP_015789461.1  solute carrier family 41 member 2

      UniProtKB/TrEMBL
      T1JPN7
      Conserved Domains (1) summary
      pfam01769
      Location:343 → 484
      MgtE; Divalent cation transporter

    3. XM_025162267.1 → XP_025018035.1  solute carrier family 41 member 2

      UniProtKB/TrEMBL
      T1JPN7
      Conserved Domains (1) summary
      pfam01769
      Location:343 → 484
      MgtE; Divalent cation transporter

    4. XM_015933998.2 → XP_015789484.1  solute carrier family 41 member 2

      UniProtKB/TrEMBL
      T1JPN7
      Conserved Domains (1) summary
      pfam01769
      Location:343 → 484
      MgtE; Divalent cation transporter

    5. XM_015933983.2 → XP_015789469.1  solute carrier family 41 member 2

      UniProtKB/TrEMBL
      T1JPN7
      Conserved Domains (1) summary
      pfam01769
      Location:343 → 484
      MgtE; Divalent cation transporter

    6. XM_015934006.2 → XP_015789492.1  solute carrier family 41 member 2

      UniProtKB/TrEMBL
      T1JPN7
      Conserved Domains (1) summary
      pfam01769
      Location:343 → 484
      MgtE; Divalent cation transporter
    Nucleotide Protein Strain
    Heading Accession and Version

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