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    ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 [ Myotis brandtii (Brandt's bat) ]

    Gene ID: 102245435, updated on 30-Mar-2024

    Summary

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    Gene symbol
    ANKFN1
    Gene description
    ankyrin repeat and fibronectin type III domain containing 1
    Locus tag
    D623_10020703
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis brandtii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Orthologs
    human mouse all
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    Genomic context

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    See ANKFN1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005364711.1 (1242423..1693226, complement)

    NW_005364711.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106727178 Neighboring gene chromosome unknown C17orf67 homolog Neighboring gene noggin Neighboring gene uncharacterized LOC106727179 Neighboring gene phosphatidylcholine transfer protein Neighboring gene transmembrane protein 100

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005364711.1 Unplaced Scaffold Reference ASM41265v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in establishment of mitotic spindle orientation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of establishment of bipolar cell polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in spindle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and fibronectin type-III domain-containing protein 1
    Names
    Ankyrin repeat and fibronectin type-III domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM41265v1

    Genomic

    1. NW_005364711.1 Reference ASM41265v1

      Range
      1242423..1693226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005872543.2 → XP_005872605.1  ankyrin repeat and fibronectin type-III domain-containing protein 1

      Conserved Domains (4) summary
      cd00063
      Location:365 → 457
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00204
      Location:226 → 292
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:231 → 288
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:231 → 265
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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