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    TEL2 terminal EAR1-like 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843102, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TEL2
    Official Full Name
    terminal EAR1-like 2
    Primary source
    TAIR:AT1G67770
    Locus tag
    AT1G67770
    See related
    Araport:AT1G67770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12A21.10; F12A21_10; terminal EAR1-like 2
    Summary
    Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL2 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins. Expression patterns were similar to TEL1, with lower expression levels in most tissues examined.
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    Genomic context

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    See TEL2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (25407864..25410165)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pectate lyase family protein Neighboring gene TCP-1/cpn60 chaperonin family protein Neighboring gene CLAVATA3/ESR-RELATED 8 Neighboring gene Zinc-finger domain of monoamine-oxidase A repressor R1 protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PLASTOCHRON2 regulates leaf initiation and maturation in rice. Kawakatsu T, et al. Plant Cell, 2006 Mar. PMID 16461585, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    terminal EAR1-like 2
    NP_176943.1
    • terminal EAR1-like 2 (TEL2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 1 (TAIR:AT3G26120.1); Has 114879 Blast hits to 113543 proteins in 3746 species: Archae - 105; Bacteria - 13385; Metazoa - 42146; Fungi - 9605; Plants - 32529; Viruses - 373; Other Eukaryotes - 16736 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25407864..25410165
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105445.2 → NP_176943.1  terminal EAR1-like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176943.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WQI9, Q9FXE0
      Conserved Domains (3) summary
      cd12526
      Location:79 → 141
      RRM1_EAR1_like; RNA recognition motif 1 in terminal EAR1-like proteins
      cd12527
      Location:182 → 252
      RRM2_EAR1_like; RNA recognition motif 2 in terminal EAR1-like proteins
      cd12530
      Location:336 → 439
      RRM3_EAR1_like; RNA recognition motif 3 in terminal EAR1-like proteins
    Nucleotide Protein
    Heading Accession and Version

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