U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    BBX14 B-box type zinc finger protein with CCT domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843181, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    BBX14
    Official Full Name
    B-box type zinc finger protein with CCT domain-containing protein
    Primary source
    TAIR:AT1G68520
    Locus tag
    AT1G68520
    See related
    Araport:AT1G68520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    B-box domain protein 14; T26J14.9; T26J14_9
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BBX14 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (25708175..25710989, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene translocase subunit seca Neighboring gene uncharacterized protein Neighboring gene LOB domain-containing protein 42 Neighboring gene uncharacterized protein Neighboring gene 3-ketoacyl-CoA synthase 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Arabidopsis BBX14 is involved in high light acclimation and seedling development. Atanasov V, et al. Plant J, 2024 Apr. PMID 38128030
    2. Arabidopsis BBX14 negatively regulates nitrogen starvation- and dark-induced leaf senescence. Buelbuel S, et al. Plant J, 2023 Oct. PMID 37382898
    3. Identification of LOV KELCH PROTEIN2 (LKP2)-interacting factors that can recruit LKP2 to nuclear bodies. Fukamatsu Y, et al. Plant Cell Physiol, 2005 Aug. PMID 15937324
    4. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    5. An Arabidopsis gene regulatory network for secondary cell wall synthesis. Taylor-Teeples M, et al. Nature, 2015 Jan 29. PMID 25533953, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arabidopsis BBX14 is involved in high light acclimation and seedling development.
      Title: Arabidopsis BBX14 is involved in high light acclimation and seedling development.
    2. Arabidopsis BBX14 negatively regulates nitrogen starvation- and dark-induced leaf senescence.
      Title: Arabidopsis BBX14 negatively regulates nitrogen starvation- and dark-induced leaf senescence.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    • At1g68520_Arabidopsis_lyrata_ssp._lyrata_USA10 (e-PCR)
    • At1g68520_Arabidopsis_lyrata_ssp._petraea_GER1 (e-PCR)
    NM_105523.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    B-box type zinc finger protein with CCT domain-containing protein
    NP_564932.1
    • B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G25440.1); Has 3472 Blast hits to 2352 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 1; Plants - 3365; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25708175..25710989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105523.3 → NP_564932.1  B-box type zinc finger protein with CCT domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564932.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LG76, Q93Y24, Q9CA29
      UniProtKB/TrEMBL
      A0A178WLD4, A0A5S9WQK5, A0A654EM85
      Conserved Domains (2) summary
      cd19821
      Location:16 → 59
      Bbox1_BBX-like; B-box-type 1 zinc finger found in B-box (BBX) family of plant transcription factors and similar proteins
      pfam06203
      Location:357 → 400
      CCT; CCT motif
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LG76.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools