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    Transmembrane protein 97, Putative [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839261, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Transmembrane protein 97, Putative
    Primary source
    TAIR:AT1G05210
    Locus tag
    AT1G05210
    See related
    Araport:AT1G05210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    YUP8H12.18; YUP8H12_18
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (1510404..1511683)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glutamate receptor 3.4 Neighboring gene ncRNA Neighboring gene hexokinase-1 protein Neighboring gene ncRNA Neighboring gene Transmembrane protein 97, Putative Neighboring gene ncRNA Neighboring gene homeodomain GLABROUS 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_100400.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein 97, Putative
    NP_563731.1
    • Transmembrane protein 97, predicted; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: Transmembrane protein 97, predicted (TAIR:AT2G32380.1); Has 151 Blast hits to 151 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 14; Plants - 77; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1510404..1511683
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100400.4 → NP_563731.1  Transmembrane protein 97, Putative [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563731.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W8R1, O23047
      Conserved Domains (1) summary
      pfam10914
      Location:11 → 145
      DUF2781; Protein of unknown function (DUF2781)
    Nucleotide Protein
    Heading Accession and Version

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