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    TTHERM_00052260 cytoplasmic and cytosolic malate dehydrogenase family protein [ Tetrahymena thermophila SB210 ]

    Gene ID: 7827116, updated on 26-Jun-2024

    Summary

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    Gene symbol
    TTHERM_00052260
    Gene description
    cytoplasmic and cytosolic malate dehydrogenase family protein
    Locus tag
    TTHERM_00052260
    Gene type
    protein coding
    RNA name
    cytoplasmic and cytosolic malate dehydrogenase family protein
    RefSeq status
    PROVISIONAL
    Organism
    Tetrahymena thermophila SB210 (strain: SB210)
    Lineage
    Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena
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    Genomic context

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    Exon count:
    2

    NW_002476426.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein, putative Neighboring gene vesicle transporter SFT2B Neighboring gene hypothetical protein Neighboring gene EF hand protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002476426.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-malate dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in NADH metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in malate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oxaloacetate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    cytoplasmic and cytosolic malate dehydrogenase family protein
    XP_001014922.2
    • encoded by transcript TTHERM_00052260A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002476426.1 Reference assembly

      Range
      1370305..1371608 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001014922.3 → XP_001014922.2  cytoplasmic and cytosolic malate dehydrogenase family protein [Tetrahymena thermophila SB210]

      See identical proteins and their annotated locations for XP_001014922.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q23CW4
      Conserved Domains (2) summary
      cd01336
      Location:44 → 363
      MDH_cytoplasmic_cytosolic; Cytoplasmic and cytosolic Malate dehydrogenases
      PRK05442
      Location:46 → 360
      PRK05442; malate dehydrogenase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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