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    PHSY_007513 hypothetical protein [ Pseudozyma hubeiensis SY62 ]

    Gene ID: 24112776, updated on 9-Nov-2023

    Summary

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    Gene symbol
    PHSY_007513
    Gene description
    hypothetical protein
    Locus tag
    PHSY_007513
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Pseudozyma hubeiensis SY62 (strain: SY62)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma
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    Genomic context

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    See PHSY_007513 in Genome Data Viewer
    Exon count:
    1

    NW_012133852.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene thioredoxin Neighboring gene THO complex subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012133852.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft Genome Sequence of the Basidiomycetous Yeast-Like Fungus Pseudozyma hubeiensis SY62, Which Produces an Abundant Amount of the Biosurfactant Mannosylerythritol Lipids. Konishi M, et al. Genome Announc, 2013 Jun 27. PMID 23814110, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_012133852.1 Reference assembly

      Range
      312903..315491 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012338107.1 → XP_012193497.1  hypothetical protein PHSY_007513 [Pseudozyma hubeiensis SY62]

      See identical proteins and their annotated locations for XP_012193497.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      R9PP84
      Conserved Domains (5) summary
      smart00668
      Location:304 → 353
      CTLH; C-terminal to LisH motif
      COG2319
      Location:529 → 841
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:524 → 841
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:577 → 613
      7WD40; WD40 repeat [structural motif]
      cl01077
      Location:55 → 131
      SIMPL; Protein of unknown function (DUF541)
    Nucleotide Protein
    Heading Accession and Version

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