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    PHSY_002534 potential Arf GTPase-activating protein [ Pseudozyma hubeiensis SY62 ]

    Gene ID: 24107827, updated on 9-Nov-2023

    Summary

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    Gene symbol
    PHSY_002534
    Gene description
    potential Arf GTPase-activating protein
    Locus tag
    PHSY_002534
    Gene type
    protein coding
    RNA name
    potential Arf GTPase-activating protein
    RefSeq status
    PROVISIONAL
    Organism
    Pseudozyma hubeiensis SY62 (strain: SY62)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma
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    Genomic context

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    See PHSY_002534 in Genome Data Viewer
    Exon count:
    2

    NW_012133806.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA-Gly Neighboring gene alpha/beta hydrolase fold domain containing protein Neighboring gene potential regulator of salt tolerance Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012133806.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft Genome Sequence of the Basidiomycetous Yeast-Like Fungus Pseudozyma hubeiensis SY62, Which Produces an Abundant Amount of the Biosurfactant Mannosylerythritol Lipids. Konishi M, et al. Genome Announc, 2013 Jun 27. PMID 23814110, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    potential Arf GTPase-activating protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_012133806.1 Reference assembly

      Range
      50355..51532 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012333158.1 → XP_012188548.1  potential Arf GTPase-activating protein [Pseudozyma hubeiensis SY62]

      See identical proteins and their annotated locations for XP_012188548.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      R9P169
      Conserved Domains (1) summary
      pfam01412
      Location:15 → 127
      ArfGap; Putative GTPase activating protein for Arf
    Nucleotide Protein
    Heading Accession and Version

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