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    slc-17.6 MFS domain-containing protein;Major facilitator superfamily (MFS) profile domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171781, updated on 9-Dec-2024

    Summary

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    Official Symbol
    slc-17.6
    Official Full Name
    MFS domain-containing protein;Major facilitator superfamily (MFS) profile domain-containing protein
    Primary source
    WormBase:WBGene00017398
    Locus tag
    CELE_F12B6.2
    See related
    AllianceGenome:WB:WBGene00017398
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable transmembrane transporter activity. Predicted to be involved in monoatomic anion transport. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See slc-17.6 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    12
    Sequence:
    Chromosome: I; NC_003279.8 (2250131..2254908)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene WSN domain-containing protein Neighboring gene ncRNA Neighboring gene Ligand-Gated ion Channel Neighboring gene ABC transporter domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Gly Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MFS domain-containing protein;Major facilitator superfamily (MFS) profile domain-containing protein
    NP_001293358.1
    • Confirmed by transcript evidence
    NP_490947.2
    • Confirmed by transcript evidence
    NP_740804.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      2250131..2254908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058546.6 → NP_490947.2  Major facilitator superfamily (MFS) profile domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_490947.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZQ1
      Conserved Domains (1) summary
      cl28910
      Location:30 → 453
      MFS; Major Facilitator Superfamily

    2. NM_171833.6 → NP_740804.1  Major facilitator superfamily (MFS) profile domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_740804.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZQ3
      Conserved Domains (1) summary
      cl28910
      Location:56 → 411
      MFS; Major Facilitator Superfamily

    3. NM_001306429.3 → NP_001293358.1  MFS domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293358.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5M917

    RNA

    1. NR_131353.1 RNA Sequence

      Status: REVIEWED

    2. NR_131354.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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