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    LOC105625536 mitochondrial intermediate peptidase-like [ Atta cephalotes ]

    Gene ID: 105625536, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC105625536
    Gene description
    mitochondrial intermediate peptidase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Atta cephalotes
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC105625536 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Attacep1.0 (GCF_000143395.1) Unplaced Scaffold NW_012132571.1 (209..1747)

    NW_012132571.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012132571.1 Unplaced Scaffold Reference Attacep1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein processing involved in protein targeting to mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial intermediate peptidase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Atta cephalotes Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Attacep1.0

    Genomic

    1. NW_012132571.1 Reference Attacep1.0

      Range
      209..1747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012206857.1 → XP_012062247.1  mitochondrial intermediate peptidase-like

      UniProtKB/TrEMBL
      A0A158NXI9
      Conserved Domains (1) summary
      cl14813
      Location:2 → 232
      GluZincin; Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins)
    Nucleotide Protein
    Heading Accession and Version

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