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    CG13539 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37680, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG13539provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034833
    Locus tag
    Dmel_CG13539
    See related
    AllianceGenome:FB:FBgn0034833
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13539
    Orthologs
    all
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    Genomic context

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    See CG13539 in Genome Data Viewer
    Location:
    59D2-59D2; 2-102 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23183977..23185288)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19071500..19072811)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene sidestep V Neighboring gene Large Subunit 2 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    2. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13539-PA
    CG13539-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      23183977..23185288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299830.1 → NP_001286759.1  uncharacterized protein Dmel_CG13539, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286759.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W1T5
      Conserved Domains (1) summary
      pfam07368
      Location:37 → 260
      DUF1487; Protein of unknown function (DUF1487)

    2. NM_137924.2 → NP_611768.1  uncharacterized protein Dmel_CG13539, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611768.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W1T5
      Related
      FBpp0071907, FBtr0071998
      Conserved Domains (1) summary
      pfam07368
      Location:37 → 260
      DUF1487; Protein of unknown function (DUF1487)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W1T5 Q9W1T5

    Gene LinkOut

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