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    CG11400 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36935, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11400provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034198
    Locus tag
    Dmel_CG11400
    See related
    AllianceGenome:FB:FBgn0034198
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11400
    Summary
    Is expressed in embryonic/larval midgut and organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11400 in Genome Data Viewer
    Location:
    54A1-54A1; 2-82 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17134129..17135345)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13021634..13022850)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Accessory gland protein 54A1 Neighboring gene pseudo Neighboring gene Growth-blocking peptide 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interaction of coactivators with promoter. Soshnikova NV, et al. Dokl Biochem Biophys, 2008 Nov-Dec. PMID 19230385
    2. Transcription coactivator SAYP combines chromatin remodeler Brahma and transcription initiation factor TFIID into a single supercomplex. Vorobyeva NE, et al. Proc Natl Acad Sci U S A, 2009 Jul 7. PMID 19541607, Free PMC Article
    3. A global genetic interaction network by single-cell imaging and machine learning. Heigwer F, et al. Cell Syst, 2023 May 17. PMID 37116498, Free PMC Article
    4. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662
    5. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11400-PA
    CG11400-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      17134129..17135345
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299591.1 → NP_001286520.1  uncharacterized protein Dmel_CG11400, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286520.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JV39

    2. NM_137349.3 → NP_611193.1  uncharacterized protein Dmel_CG11400, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611193.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JV39
      Related
      FBpp0086138
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7JV39 Q7JV39

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