U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    CYP705A22 cytochrome P450, family 705, subfamily A, polypeptide 22 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821556, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CYP705A22
    Official Full Name
    cytochrome P450, family 705, subfamily A, polypeptide 22
    Primary source
    TAIR:AT3G20130
    Locus tag
    AT3G20130
    See related
    Araport:AT3G20130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cytochrome P450; family 705; GPS1; gravity persistence signal 1; polypeptide 22; subfamily A
    Summary
    Encodes a member of the CYP705A family of cytochrome P450 enzymes. Mutants show altered gravitropic responses.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CYP705A22 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (7026808..7028916)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 705, subfamily A, polypeptide 19 Neighboring gene cytochrome P450, family 705, subfamily A, polypeptide 20 Neighboring gene cytochrome P450, family 705, subfamily A, polypeptide 21 Neighboring gene cytochrome P450, family 705, subfamily A, polypeptide 23 Neighboring gene Kinesin motor family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gravity Persistent Signal 1 (GPS1) reveals novel cytochrome P450s involved in gravitropism. Withers JC, et al. Am J Bot, 2013 Jan. PMID 23284057
    2. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. GPS1 encodes CYP705A22, a cytochrome P450 monooxygenase (P450). [GPS1]
      Title: Gravity Persistent Signal 1 (GPS1) reveals novel cytochrome P450s involved in gravitropism.
    Submit: New GeneRIF Correction

    Pathways from PubChem

    Go to the top of the page

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    NM_001084724.2
    NM_112904.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within gravitropism IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within positive gravitropism IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endomembrane system IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytochrome P450, family 705, subfamily A, polypeptide 22
    NP_001078193.1
    • ''cytochrome P450, family 705, subfamily A, polypeptide 22'' (CYP705A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 3 (TAIR:AT4G15360.1); Has 32028 Blast hits to 31912 proteins in 1630 species: Archae - 48; Bacteria - 3159; Metazoa - 11516; Fungi - 7081; Plants - 9057; Viruses - 3; Other Eukaryotes - 1164 (source: NCBI BLink).
    NP_188648.1
    • ''cytochrome P450, family 705, subfamily A, polypeptide 22'' (CYP705A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 3 (TAIR:AT4G15360.1); Has 32704 Blast hits to 32445 proteins in 1637 species: Archae - 48; Bacteria - 3152; Metazoa - 11633; Fungi - 7273; Plants - 9456; Viruses - 6; Other Eukaryotes - 1136 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7026808..7028916
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112904.3 → NP_188648.1  cytochrome P450, family 705, subfamily A, polypeptide 22 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188648.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LJY5
      UniProtKB/TrEMBL
      A0A178VM93, A0A5S9XDX5, A0A7G2EQJ1
      Conserved Domains (1) summary
      cd20655
      Location:75 → 505
      CYP93; cytochrome P450 family 93

    2. NM_001084724.2 → NP_001078193.1  cytochrome P450, family 705, subfamily A, polypeptide 22 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078193.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EQJ1, A8MQL2
      Conserved Domains (1) summary
      cl12078
      Location:73 → 483
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LJY5.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.